Advanced GitHub Security Best Practices [Cheat Sheet]

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After reading this cheat sheet, you’ll be able to:

  • Secure GitHub authentication with MFA, SSO, and hardened key/token management.

  • Protect GitHub organizations and repositories with RBAC, branch protection, and fine-grained rulesets.

  • Lock down GitHub Actions workflows against supply chain attacks and privilege escalation.

  • Monitor and audit GitHub activity with logs, webhooks, and SIEM integrations.

  • Apply modern DevSecOps practices to safeguard GitHub pipelines and reduce software supply chain risk.

Key Takeaways
  • GitHub is a top target for attackersWith its central role in modern software development, securing GitHub is critical to protecting both open-source and proprietary code.
  • Strong authentication is non-negotiableMFA, SSO, and hardened key/token management form the first line of defense against compromised accounts.
  • Misconfigurations create the biggest risksWeak defaults, ungoverned third-party apps, and lax branch protections can quickly expose your organization to supply chain threats.
  • Security must extend to CI/CD workflowsHardening GitHub Actions, pinning dependencies, and isolating untrusted code are essential for preventing pipeline exploitation.

Is this cheat sheet for me?

This guide is for you if you:

  • Manage GitHub repositories or organizations in a professional setting.

  • Work in platform engineering, DevOps, or application security roles and are responsible for securing CI/CD pipelines.

  • Need actionable guidance to protect intellectual property, enforce governance, and meet compliance requirements.

  • Are evaluating tools and processes to strengthen supply chain security across development and deployment workflows.

Whether you’re a developer, engineering manager, or security architect, this cheat sheet helps you safeguard GitHub environments without slowing down innovation.

What's included?

Inside, you’ll find:

  • Authentication and identity security best practices — MFA, SSO, SSH/PAT management.

  • Organization-level controls — securing third-party access, IP allow lists, and centralized user management.

  • Repository safeguards — security policies, branch protection, rulesets, and secret scanning.

  • GitHub Actions hardening — safe workflow permissions, SHA pinning, and untrusted contribution isolation.

  • Audit and monitoring guidance — logging, webhooks, and SIEM integration for proactive detection.

  • Next-gen GitHub security with Wiz Code — posture management, runtime detection, compliance checks, and graph-based visibility.

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